Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Nphp4P59240 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nphp4P59240 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nphp4P59240 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Gm12134-201ENSMUST00000122109 520 ntBASIC19.18■□□□□ 0.66
Nphp4P59240 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.18■□□□□ 0.66
Nphp4P59240 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nphp4P59240 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nphp4P59240 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nphp4P59240 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC19.17■□□□□ 0.66
Nphp4P59240 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nphp4P59240 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nphp4P59240 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nphp4P59240 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.17■□□□□ 0.66
Nphp4P59240 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.17■□□□□ 0.66
Nphp4P59240 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.17■□□□□ 0.66
Nphp4P59240 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nphp4P59240 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.17■□□□□ 0.66
Nphp4P59240 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nphp4P59240 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.16■□□□□ 0.66
Nphp4P59240 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nphp4P59240 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC19.16■□□□□ 0.66
Nphp4P59240 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC19.16■□□□□ 0.66
Nphp4P59240 Gm7287-201ENSMUST00000205267 602 ntBASIC19.16■□□□□ 0.66
Nphp4P59240 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nphp4P59240 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms