Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tpm1P58771 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.96■□□□□ 0.15
Tpm1P58771 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Tpm1P58771 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.96■□□□□ 0.15
Tpm1P58771 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.96■□□□□ 0.15
Tpm1P58771 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Gm25990-201ENSMUST00000102440 86 ntBASIC15.96■□□□□ 0.15
Tpm1P58771 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.96■□□□□ 0.15
Tpm1P58771 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.96■□□□□ 0.15
Tpm1P58771 Gm18246-201ENSMUST00000221023 728 ntBASIC15.96■□□□□ 0.15
Tpm1P58771 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Tpm1P58771 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tpm1P58771 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Tpm1P58771 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
Tpm1P58771 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Tpm1P58771 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tpm1P58771 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tpm1P58771 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Tpm1P58771 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.95■□□□□ 0.14
Tpm1P58771 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm8749-201ENSMUST00000117737 331 ntBASIC15.95■□□□□ 0.14
Tpm1P58771 Gm11764-201ENSMUST00000120221 623 ntBASIC15.95■□□□□ 0.14
Tpm1P58771 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm5682-201ENSMUST00000173402 505 ntBASIC15.95■□□□□ 0.14
Tpm1P58771 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Tpm1P58771 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Tpm1P58771 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.95■□□□□ 0.14
Tpm1P58771 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.95■□□□□ 0.14
Tpm1P58771 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Tpm1P58771 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tpm1P58771 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.94■□□□□ 0.14
Tpm1P58771 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.94■□□□□ 0.14
Tpm1P58771 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Tpm1P58771 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Tpm1P58771 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Gm13464-201ENSMUST00000119418 935 ntBASIC15.94■□□□□ 0.14
Tpm1P58771 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.94■□□□□ 0.14
Tpm1P58771 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.94■□□□□ 0.14
Tpm1P58771 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.94■□□□□ 0.14
Tpm1P58771 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.94■□□□□ 0.14
Tpm1P58771 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms