Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Gm27321-201ENSMUST00000185021 205 ntBASIC17.52■□□□□ 0.4
Tm6sf1P58749 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.52■□□□□ 0.4
Tm6sf1P58749 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tm6sf1P58749 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tm6sf1P58749 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Tm6sf1P58749 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Tm6sf1P58749 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.51■□□□□ 0.39
Tm6sf1P58749 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.51■□□□□ 0.39
Tm6sf1P58749 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.51■□□□□ 0.39
Tm6sf1P58749 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Gm6888-201ENSMUST00000221983 706 ntBASIC17.51■□□□□ 0.39
Tm6sf1P58749 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tm6sf1P58749 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.5■□□□□ 0.39
Tm6sf1P58749 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tm6sf1P58749 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.49■□□□□ 0.39
Tm6sf1P58749 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.49■□□□□ 0.39
Tm6sf1P58749 Gm43703-201ENSMUST00000200523 763 ntBASIC17.49■□□□□ 0.39
Tm6sf1P58749 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.49■□□□□ 0.39
Tm6sf1P58749 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.49■□□□□ 0.39
Tm6sf1P58749 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tm6sf1P58749 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tm6sf1P58749 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms