Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Rab4aP56371 Gm16061-201ENSMUST00000122167 857 ntBASIC11.3□□□□□ -0.6
Rab4aP56371 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.3□□□□□ -0.6
Rab4aP56371 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.3□□□□□ -0.6
Rab4aP56371 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.3□□□□□ -0.6
Rab4aP56371 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab4aP56371 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab4aP56371 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab4aP56371 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Gm715-201ENSMUST00000117865 831 ntBASIC11.29□□□□□ -0.6
Rab4aP56371 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Rab4aP56371 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.29□□□□□ -0.6
Rab4aP56371 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rab4aP56371 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab4aP56371 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab4aP56371 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Rab4aP56371 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab4aP56371 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Rab4aP56371 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab4aP56371 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab4aP56371 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab4aP56371 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab4aP56371 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab4aP56371 Gm44430-201ENSMUST00000203376 995 ntBASIC11.28□□□□□ -0.6
Rab4aP56371 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.28□□□□□ -0.6
Rab4aP56371 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.28□□□□□ -0.6
Rab4aP56371 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab4aP56371 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Rab4aP56371 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab4aP56371 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms