Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkn2bP55271 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdkn2bP55271 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cdkn2bP55271 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkn2bP55271 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkn2bP55271 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdkn2bP55271 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Gm28659-201ENSMUST00000188013 759 ntBASIC13.7□□□□□ -0.22
Cdkn2bP55271 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.7□□□□□ -0.22
Cdkn2bP55271 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.7□□□□□ -0.22
Cdkn2bP55271 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.7□□□□□ -0.22
Cdkn2bP55271 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdkn2bP55271 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.69□□□□□ -0.22
Cdkn2bP55271 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.69□□□□□ -0.22
Cdkn2bP55271 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdkn2bP55271 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.68□□□□□ -0.22
Cdkn2bP55271 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.68□□□□□ -0.22
Cdkn2bP55271 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Gm7461-201ENSMUST00000058918 827 ntBASIC13.68□□□□□ -0.22
Cdkn2bP55271 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.68□□□□□ -0.22
Cdkn2bP55271 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms