Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm38225-201ENSMUST00000194001 393 ntBASIC12.8□□□□□ -0.36
Abcd3P55096 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.8□□□□□ -0.36
Abcd3P55096 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.8□□□□□ -0.36
Abcd3P55096 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.8□□□□□ -0.36
Abcd3P55096 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Abcd3P55096 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.8□□□□□ -0.36
Abcd3P55096 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.8□□□□□ -0.36
Abcd3P55096 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Abcd3P55096 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Abcd3P55096 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Abcd3P55096 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.79□□□□□ -0.36
Abcd3P55096 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Mir1895-201ENSMUST00000122615 79 ntBASIC12.79□□□□□ -0.36
Abcd3P55096 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.79□□□□□ -0.36
Abcd3P55096 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.79□□□□□ -0.36
Abcd3P55096 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Abcd3P55096 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Abcd3P55096 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.79□□□□□ -0.36
Abcd3P55096 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Abcd3P55096 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Abcd3P55096 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Abcd3P55096 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.78□□□□□ -0.36
Abcd3P55096 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Abcd3P55096 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.78□□□□□ -0.36
Abcd3P55096 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Gm6736-201ENSMUST00000166583 948 ntBASIC12.78□□□□□ -0.36
Abcd3P55096 Gm18889-201ENSMUST00000174284 929 ntBASIC12.78□□□□□ -0.36
Abcd3P55096 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.78□□□□□ -0.36
Abcd3P55096 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.78□□□□□ -0.36
Abcd3P55096 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Abcd3P55096 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.78□□□□□ -0.36
Abcd3P55096 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Abcd3P55096 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Abcd3P55096 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms