Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm27892-201ENSMUST00000185017 106 ntBASIC16.63■□□□□ 0.25
Cacnb3P54285 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cacnb3P54285 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.63■□□□□ 0.25
Cacnb3P54285 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.63■□□□□ 0.25
Cacnb3P54285 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacnb3P54285 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cacnb3P54285 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.62■□□□□ 0.25
Cacnb3P54285 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.62■□□□□ 0.25
Cacnb3P54285 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacnb3P54285 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.62■□□□□ 0.25
Cacnb3P54285 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.62■□□□□ 0.25
Cacnb3P54285 Gm18307-201ENSMUST00000206864 949 ntBASIC16.62■□□□□ 0.25
Cacnb3P54285 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacnb3P54285 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.62■□□□□ 0.25
Cacnb3P54285 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacnb3P54285 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb3P54285 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.61■□□□□ 0.25
Cacnb3P54285 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cacnb3P54285 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb3P54285 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm37714-201ENSMUST00000194742 342 ntBASIC16.6■□□□□ 0.25
Cacnb3P54285 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacnb3P54285 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb3P54285 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb3P54285 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms