Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.19□□□□□ -0.14
Atxn1P54254 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Atxn1P54254 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atxn1P54254 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 Gm16476-201ENSMUST00000221544 139 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 Dupd1-202ENSMUST00000224735 548 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atxn1P54254 Olfr582-201ENSMUST00000098212 960 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.19□□□□□ -0.14
Atxn1P54254 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atxn1P54254 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Atxn1P54254 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.19□□□□□ -0.14
Atxn1P54254 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atxn1P54254 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atxn1P54254 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Atxn1P54254 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Atxn1P54254 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Gm42693-201ENSMUST00000196779 631 ntBASIC14.18□□□□□ -0.14
Atxn1P54254 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.18□□□□□ -0.14
Atxn1P54254 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.18□□□□□ -0.14
Atxn1P54254 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Atxn1P54254 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.18□□□□□ -0.14
Atxn1P54254 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atxn1P54254 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.17□□□□□ -0.14
Atxn1P54254 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Atxn1P54254 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Gm18827-201ENSMUST00000188341 790 ntBASIC14.17□□□□□ -0.14
Atxn1P54254 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.17□□□□□ -0.14
Atxn1P54254 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.17□□□□□ -0.14
Atxn1P54254 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.17□□□□□ -0.14
Atxn1P54254 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.17□□□□□ -0.14
Atxn1P54254 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atxn1P54254 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
Atxn1P54254 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms