Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm6983-201ENSMUST00000214912 628 ntBASIC14.53□□□□□ -0.08
Sox1P53783 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox1P53783 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Gm3222-201ENSMUST00000071282 990 ntBASIC14.53□□□□□ -0.08
Sox1P53783 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox1P53783 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox1P53783 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox1P53783 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox1P53783 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox1P53783 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox1P53783 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox1P53783 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.52□□□□□ -0.09
Sox1P53783 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.52□□□□□ -0.09
Sox1P53783 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.52□□□□□ -0.09
Sox1P53783 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.52□□□□□ -0.09
Sox1P53783 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sox1P53783 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sox1P53783 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Sox1P53783 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sox1P53783 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox1P53783 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox1P53783 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox1P53783 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox1P53783 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Sox1P53783 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Gm29396-201ENSMUST00000185659 716 ntBASIC14.51□□□□□ -0.09
Sox1P53783 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.51□□□□□ -0.09
Sox1P53783 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.51□□□□□ -0.09
Sox1P53783 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.51□□□□□ -0.09
Sox1P53783 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.51□□□□□ -0.09
Sox1P53783 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.51□□□□□ -0.09
Sox1P53783 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox1P53783 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox1P53783 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox1P53783 Dancr-204ENSMUST00000132389 2347 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Sox1P53783 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox1P53783 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox1P53783 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Sox1P53783 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox1P53783 Gm14381-201ENSMUST00000122105 414 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms