Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6v1aP50516 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6v1aP50516 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.15■□□□□ 0.34
Atp6v1aP50516 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.15■□□□□ 0.34
Atp6v1aP50516 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6v1aP50516 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.14■□□□□ 0.34
Atp6v1aP50516 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.14■□□□□ 0.33
Atp6v1aP50516 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm12957-201ENSMUST00000117835 377 ntBASIC17.14■□□□□ 0.33
Atp6v1aP50516 Mir1894-201ENSMUST00000122802 81 ntBASIC17.14■□□□□ 0.33
Atp6v1aP50516 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.14■□□□□ 0.33
Atp6v1aP50516 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.14■□□□□ 0.33
Atp6v1aP50516 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6v1aP50516 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.14■□□□□ 0.33
Atp6v1aP50516 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.13■□□□□ 0.33
Atp6v1aP50516 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm45841-201ENSMUST00000207700 164 ntBASIC17.13■□□□□ 0.33
Atp6v1aP50516 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.13■□□□□ 0.33
Atp6v1aP50516 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6v1aP50516 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.12■□□□□ 0.33
Atp6v1aP50516 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6v1aP50516 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms