Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rfx3P48381 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx3P48381 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rfx3P48381 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Rfx3P48381 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Gm16198-201ENSMUST00000118766 670 ntBASIC12.93□□□□□ -0.34
Rfx3P48381 Gm13464-201ENSMUST00000119418 935 ntBASIC12.93□□□□□ -0.34
Rfx3P48381 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.93□□□□□ -0.34
Rfx3P48381 Gm5177-201ENSMUST00000183092 997 ntBASIC12.93□□□□□ -0.34
Rfx3P48381 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.93□□□□□ -0.34
Rfx3P48381 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx3P48381 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx3P48381 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Matn2-206ENSMUST00000228570 2798 ntBASIC12.92□□□□□ -0.34
Rfx3P48381 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rfx3P48381 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.92□□□□□ -0.34
Rfx3P48381 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.92□□□□□ -0.34
Rfx3P48381 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.92□□□□□ -0.34
Rfx3P48381 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfx3P48381 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx3P48381 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.91□□□□□ -0.34
Rfx3P48381 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Rfx3P48381 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Gm27301-201ENSMUST00000184012 127 ntBASIC12.91□□□□□ -0.34
Rfx3P48381 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.91□□□□□ -0.34
Rfx3P48381 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.91□□□□□ -0.34
Rfx3P48381 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms