Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.92□□□□□ -0.02
HttP42859 Gm16479-201ENSMUST00000121706 932 ntBASIC14.92□□□□□ -0.02
HttP42859 Gm13570-201ENSMUST00000140763 309 ntBASIC14.92□□□□□ -0.02
HttP42859 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.92□□□□□ -0.02
HttP42859 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Gm10268-201ENSMUST00000085340 555 ntBASIC14.92□□□□□ -0.02
HttP42859 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HttP42859 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HttP42859 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Gm14130-201ENSMUST00000118417 987 ntBASIC14.91□□□□□ -0.02
HttP42859 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HttP42859 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.91□□□□□ -0.02
HttP42859 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Gm3890-201ENSMUST00000182416 207 ntBASIC14.91□□□□□ -0.02
HttP42859 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Gm18212-201ENSMUST00000211678 889 ntBASIC14.91□□□□□ -0.02
HttP42859 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.91□□□□□ -0.02
HttP42859 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HttP42859 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.91□□□□□ -0.02
HttP42859 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HttP42859 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HttP42859 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
HttP42859 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.9□□□□□ -0.02
HttP42859 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HttP42859 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.9□□□□□ -0.02
HttP42859 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.9□□□□□ -0.02
HttP42859 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.9□□□□□ -0.02
HttP42859 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HttP42859 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HttP42859 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.9□□□□□ -0.02
HttP42859 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.9□□□□□ -0.02
HttP42859 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.9□□□□□ -0.02
HttP42859 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
HttP42859 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.9□□□□□ -0.02
HttP42859 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.9□□□□□ -0.02
HttP42859 Gm14277-201ENSMUST00000121195 360 ntBASIC14.9□□□□□ -0.02
HttP42859 Gm12208-201ENSMUST00000122004 163 ntBASIC14.9□□□□□ -0.02
HttP42859 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.9□□□□□ -0.02
HttP42859 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HttP42859 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.9□□□□□ -0.02
HttP42859 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.9□□□□□ -0.02
HttP42859 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HttP42859 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HttP42859 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.89□□□□□ -0.03
HttP42859 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HttP42859 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HttP42859 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.89□□□□□ -0.03
HttP42859 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.89□□□□□ -0.03
HttP42859 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.89□□□□□ -0.03
HttP42859 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.89□□□□□ -0.03
HttP42859 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.89□□□□□ -0.03
HttP42859 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HttP42859 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.89□□□□□ -0.03
HttP42859 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.89□□□□□ -0.03
HttP42859 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.89□□□□□ -0.03
HttP42859 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HttP42859 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HttP42859 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.89□□□□□ -0.03
HttP42859 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.89□□□□□ -0.03
HttP42859 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms