Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TfamP40630 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Gm1401-201ENSMUST00000122048 772 ntBASIC13.87□□□□□ -0.19
TfamP40630 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TfamP40630 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TfamP40630 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TfamP40630 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.87□□□□□ -0.19
TfamP40630 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.87□□□□□ -0.19
TfamP40630 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TfamP40630 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.87□□□□□ -0.19
TfamP40630 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TfamP40630 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.87□□□□□ -0.19
TfamP40630 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TfamP40630 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TfamP40630 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TfamP40630 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TfamP40630 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.86□□□□□ -0.19
TfamP40630 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.86□□□□□ -0.19
TfamP40630 Gm15483-201ENSMUST00000120338 456 ntBASIC13.86□□□□□ -0.19
TfamP40630 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.86□□□□□ -0.19
TfamP40630 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.86□□□□□ -0.19
TfamP40630 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.86□□□□□ -0.19
TfamP40630 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.86□□□□□ -0.19
TfamP40630 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.86□□□□□ -0.19
TfamP40630 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TfamP40630 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TfamP40630 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TfamP40630 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TfamP40630 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.85□□□□□ -0.19
TfamP40630 Gm9727-201ENSMUST00000161387 555 ntBASIC13.85□□□□□ -0.19
TfamP40630 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.85□□□□□ -0.19
TfamP40630 Gm44492-201ENSMUST00000197012 141 ntBASIC13.85□□□□□ -0.19
TfamP40630 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Gm5364-201ENSMUST00000216789 889 ntBASIC13.85□□□□□ -0.19
TfamP40630 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.85□□□□□ -0.19
TfamP40630 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TfamP40630 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TfamP40630 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TfamP40630 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TfamP40630 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.84□□□□□ -0.19
TfamP40630 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms