Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC21.11■□□□□ 0.97
Chd1P40201 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC21.11■□□□□ 0.97
Chd1P40201 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Chd1P40201 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chd1P40201 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1P40201 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Chd1P40201 Gm8546-201ENSMUST00000178288 1264 ntBASIC21.1■□□□□ 0.97
Chd1P40201 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC21.1■□□□□ 0.97
Chd1P40201 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC21.1■□□□□ 0.97
Chd1P40201 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chd1P40201 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Chd1P40201 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1P40201 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chd1P40201 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd1P40201 Gm19208-201ENSMUST00000213861 912 ntBASIC21.09■□□□□ 0.97
Chd1P40201 Gm18615-201ENSMUST00000222919 1031 ntBASIC21.09■□□□□ 0.97
Chd1P40201 AC126253.1-202ENSMUST00000226732 835 ntBASIC21.09■□□□□ 0.97
Chd1P40201 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd1P40201 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Chd1P40201 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Chd1P40201 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC21.09■□□□□ 0.97
Chd1P40201 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Gm5523-201ENSMUST00000180415 997 ntBASIC21.09■□□□□ 0.97
Chd1P40201 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Chd1P40201 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd1P40201 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC21.09■□□□□ 0.97
Chd1P40201 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1P40201 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.08■□□□□ 0.97
Chd1P40201 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Chd1P40201 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC21.08■□□□□ 0.97
Chd1P40201 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Gm11331-201ENSMUST00000119764 288 ntBASIC21.08■□□□□ 0.97
Chd1P40201 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Chd1P40201 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC21.08■□□□□ 0.97
Chd1P40201 Gm18556-201ENSMUST00000219748 1031 ntBASIC21.08■□□□□ 0.97
Chd1P40201 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1P40201 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC21.08■□□□□ 0.96
Chd1P40201 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1P40201 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1P40201 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1P40201 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1P40201 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1P40201 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Gm25214-201ENSMUST00000104573 129 ntBASIC21.07■□□□□ 0.96
Chd1P40201 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Chd1P40201 AA914427-201ENSMUST00000193194 1166 ntBASIC21.07■□□□□ 0.96
Chd1P40201 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Chd1P40201 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1P40201 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms