Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HmgclP38060 Gm15957-201ENSMUST00000118893 974 ntBASIC14.11□□□□□ -0.15
HmgclP38060 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.11□□□□□ -0.15
HmgclP38060 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Gm27631-201ENSMUST00000184163 466 ntBASIC14.11□□□□□ -0.15
HmgclP38060 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.11□□□□□ -0.15
HmgclP38060 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.11□□□□□ -0.15
HmgclP38060 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.11□□□□□ -0.15
HmgclP38060 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HmgclP38060 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HmgclP38060 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HmgclP38060 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Gm15693-201ENSMUST00000120470 637 ntBASIC14.1□□□□□ -0.15
HmgclP38060 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Gm9719-201ENSMUST00000162765 543 ntBASIC14.1□□□□□ -0.15
HmgclP38060 Gm7774-201ENSMUST00000200064 533 ntBASIC14.1□□□□□ -0.15
HmgclP38060 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.1□□□□□ -0.15
HmgclP38060 Gm45453-201ENSMUST00000211758 853 ntBASIC14.1□□□□□ -0.15
HmgclP38060 Gm5779-201ENSMUST00000218467 910 ntBASIC14.1□□□□□ -0.15
HmgclP38060 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HmgclP38060 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.1□□□□□ -0.15
HmgclP38060 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HmgclP38060 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HmgclP38060 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.1□□□□□ -0.15
HmgclP38060 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HmgclP38060 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HmgclP38060 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HmgclP38060 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.09□□□□□ -0.15
HmgclP38060 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.09□□□□□ -0.15
HmgclP38060 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HmgclP38060 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Gm44608-201ENSMUST00000206827 855 ntBASIC14.09□□□□□ -0.15
HmgclP38060 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.09□□□□□ -0.15
HmgclP38060 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.09□□□□□ -0.15
HmgclP38060 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.09□□□□□ -0.15
HmgclP38060 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HmgclP38060 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HmgclP38060 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
HmgclP38060 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HmgclP38060 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HmgclP38060 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HmgclP38060 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HmgclP38060 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HmgclP38060 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HmgclP38060 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HmgclP38060 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HmgclP38060 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HmgclP38060 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.08□□□□□ -0.16
HmgclP38060 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.08□□□□□ -0.16
HmgclP38060 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HmgclP38060 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms