Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Foxa1P35582 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Foxa1P35582 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.24□□□□□ -0.29
Foxa1P35582 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.24□□□□□ -0.29
Foxa1P35582 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.24□□□□□ -0.29
Foxa1P35582 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.24□□□□□ -0.29
Foxa1P35582 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.24□□□□□ -0.29
Foxa1P35582 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Foxa1P35582 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Foxa1P35582 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxa1P35582 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Foxa1P35582 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.23□□□□□ -0.29
Foxa1P35582 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxa1P35582 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxa1P35582 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.23□□□□□ -0.29
Foxa1P35582 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.23□□□□□ -0.29
Foxa1P35582 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxa1P35582 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Foxa1P35582 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxa1P35582 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Foxa1P35582 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
Foxa1P35582 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.22□□□□□ -0.29
Foxa1P35582 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.22□□□□□ -0.29
Foxa1P35582 Gm5566-201ENSMUST00000116118 459 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Gm8410-201ENSMUST00000117225 605 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Foxa1P35582 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Gm9719-201ENSMUST00000162765 543 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.22□□□□□ -0.29
Foxa1P35582 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxa1P35582 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.22□□□□□ -0.29
Foxa1P35582 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Foxa1P35582 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Foxa1P35582 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxa1P35582 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms