Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 Gm45784-201ENSMUST00000188360 142 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 Gm2495-201ENSMUST00000191160 466 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sftpa1P35242 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sftpa1P35242 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.16□□□□□ -0.3
Sftpa1P35242 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.16□□□□□ -0.3
Sftpa1P35242 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Gm14660-201ENSMUST00000119809 575 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Gm27486-201ENSMUST00000184923 80 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.15□□□□□ -0.3
Sftpa1P35242 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sftpa1P35242 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sftpa1P35242 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sftpa1P35242 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sftpa1P35242 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sftpa1P35242 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.15□□□□□ -0.31
Sftpa1P35242 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm15198-201ENSMUST00000117283 177 ntBASIC13.14□□□□□ -0.31
Sftpa1P35242 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm8652-201ENSMUST00000181363 964 ntBASIC13.14□□□□□ -0.31
Sftpa1P35242 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.14□□□□□ -0.31
Sftpa1P35242 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms