Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm9002-201ENSMUST00000178437 499 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Gm8927-201ENSMUST00000181978 981 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm3222-201ENSMUST00000071282 990 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Mir497b-201ENSMUST00000093601 125 ntBASIC16.36■□□□□ 0.21
Vcam1P29533 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vcam1P29533 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vcam1P29533 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcam1P29533 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.35■□□□□ 0.21
Vcam1P29533 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vcam1P29533 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.35■□□□□ 0.21
Vcam1P29533 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.35■□□□□ 0.21
Vcam1P29533 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.35■□□□□ 0.21
Vcam1P29533 Gm43094-201ENSMUST00000196549 921 ntBASIC16.35■□□□□ 0.21
Vcam1P29533 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.35■□□□□ 0.21
Vcam1P29533 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vcam1P29533 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vcam1P29533 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.35■□□□□ 0.21
Vcam1P29533 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcam1P29533 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.34■□□□□ 0.21
Vcam1P29533 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm15376-201ENSMUST00000122258 783 ntBASIC16.34■□□□□ 0.21
Vcam1P29533 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm17150-201ENSMUST00000165577 381 ntBASIC16.34■□□□□ 0.21
Vcam1P29533 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.34■□□□□ 0.21
Vcam1P29533 Gm19078-201ENSMUST00000206311 727 ntBASIC16.34■□□□□ 0.21
Vcam1P29533 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.34■□□□□ 0.21
Vcam1P29533 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.34■□□□□ 0.21
Vcam1P29533 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vcam1P29533 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcam1P29533 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Vcam1P29533 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcam1P29533 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.33■□□□□ 0.2
Vcam1P29533 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vcam1P29533 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Vcam1P29533 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.33■□□□□ 0.2
Vcam1P29533 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms