Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp3P28862 Gm37714-201ENSMUST00000194742 342 ntBASIC15.27■□□□□ 0.04
Mmp3P28862 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.27■□□□□ 0.04
Mmp3P28862 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.27■□□□□ 0.04
Mmp3P28862 Gm19220-201ENSMUST00000222682 803 ntBASIC15.27■□□□□ 0.04
Mmp3P28862 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp3P28862 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp3P28862 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.27■□□□□ 0.04
Mmp3P28862 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Mmp3P28862 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp3P28862 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp3P28862 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Mmp3P28862 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.27■□□□□ 0.03
Mmp3P28862 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp3P28862 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Mmp3P28862 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Mmp3P28862 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Mmp3P28862 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Mmp3P28862 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.26■□□□□ 0.03
Mmp3P28862 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.26■□□□□ 0.03
Mmp3P28862 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.26■□□□□ 0.03
Mmp3P28862 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.26■□□□□ 0.03
Mmp3P28862 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.26■□□□□ 0.03
Mmp3P28862 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.26■□□□□ 0.03
Mmp3P28862 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.26■□□□□ 0.03
Mmp3P28862 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.26■□□□□ 0.03
Mmp3P28862 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Mmp3P28862 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.26■□□□□ 0.03
Mmp3P28862 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.26■□□□□ 0.03
Mmp3P28862 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.26■□□□□ 0.03
Mmp3P28862 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp3P28862 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Mmp3P28862 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp3P28862 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Mir6392-201ENSMUST00000184924 108 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 Gm18027-201ENSMUST00000218947 619 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.25■□□□□ 0.03
Mmp3P28862 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
Mmp3P28862 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp3P28862 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp3P28862 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp3P28862 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp3P28862 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.24■□□□□ 0.03
Mmp3P28862 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms