Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.94□□□□□ -0.5
Col8a2P25318 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col8a2P25318 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.94□□□□□ -0.5
Col8a2P25318 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Gm14767-201ENSMUST00000121559 586 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Gm16215-201ENSMUST00000161990 637 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Gm10275-202ENSMUST00000168697 495 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Gm27680-201ENSMUST00000184192 160 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Gm6916-202ENSMUST00000205523 195 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col8a2P25318 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Gm10275-201ENSMUST00000092620 635 ntBASIC11.94□□□□□ -0.5
Col8a2P25318 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col8a2P25318 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.94□□□□□ -0.5
Col8a2P25318 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Col8a2P25318 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Col8a2P25318 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col8a2P25318 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col8a2P25318 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 BC001981-202ENSMUST00000191393 1545 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Col8a2P25318 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.93□□□□□ -0.5
Col8a2P25318 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm23547-201ENSMUST00000158210 271 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm29667-201ENSMUST00000190817 490 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 Gm44855-201ENSMUST00000205725 362 ntBASIC11.93□□□□□ -0.5
Col8a2P25318 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.93□□□□□ -0.5
Col8a2P25318 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.93□□□□□ -0.5
Col8a2P25318 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Col8a2P25318 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col8a2P25318 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms