Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.05□□□□□ -0.32
Cbx3P23198 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.05□□□□□ -0.32
Cbx3P23198 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Gm18032-201ENSMUST00000222541 538 ntBASIC13.05□□□□□ -0.32
Cbx3P23198 Gm7367-201ENSMUST00000057611 492 ntBASIC13.05□□□□□ -0.32
Cbx3P23198 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Cbx3P23198 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.05□□□□□ -0.32
Cbx3P23198 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cbx3P23198 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cbx3P23198 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.04□□□□□ -0.32
Cbx3P23198 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cbx3P23198 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.04□□□□□ -0.32
Cbx3P23198 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.04□□□□□ -0.32
Cbx3P23198 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.04□□□□□ -0.32
Cbx3P23198 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.04□□□□□ -0.32
Cbx3P23198 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.04□□□□□ -0.32
Cbx3P23198 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cbx3P23198 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cbx3P23198 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cbx3P23198 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cbx3P23198 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Mir770-201ENSMUST00000103252 94 ntBASIC13.03□□□□□ -0.32
Cbx3P23198 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.03□□□□□ -0.32
Cbx3P23198 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cbx3P23198 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cbx3P23198 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.03□□□□□ -0.32
Cbx3P23198 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.03□□□□□ -0.32
Cbx3P23198 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cbx3P23198 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms