Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BdnfP21237 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.74□□□□□ -0.21
BdnfP21237 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.73□□□□□ -0.21
BdnfP21237 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.73□□□□□ -0.21
BdnfP21237 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
BdnfP21237 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.73□□□□□ -0.21
BdnfP21237 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.73□□□□□ -0.21
BdnfP21237 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BdnfP21237 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
BdnfP21237 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BdnfP21237 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BdnfP21237 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
BdnfP21237 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
BdnfP21237 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.72□□□□□ -0.21
BdnfP21237 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.72□□□□□ -0.21
BdnfP21237 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Gm2451-201ENSMUST00000199447 999 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Gm10290-201ENSMUST00000200451 999 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Gm7461-201ENSMUST00000058918 827 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.72□□□□□ -0.21
BdnfP21237 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BdnfP21237 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.72□□□□□ -0.21
BdnfP21237 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BdnfP21237 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
BdnfP21237 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BdnfP21237 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BdnfP21237 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms