Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC10.87□□□□□ -0.67
Fn1P11276 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Fn1P11276 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Fn1P11276 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.87□□□□□ -0.67
Fn1P11276 Gm6222-202ENSMUST00000182143 629 ntBASIC10.87□□□□□ -0.67
Fn1P11276 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.87□□□□□ -0.67
Fn1P11276 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.87□□□□□ -0.67
Fn1P11276 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.87□□□□□ -0.67
Fn1P11276 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Fn1P11276 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fn1P11276 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.87□□□□□ -0.67
Fn1P11276 Gm12208-201ENSMUST00000122004 163 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Fn1P11276 Mir1943-201ENSMUST00000158276 73 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Fn1P11276 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Fn1P11276 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Gm27438-201ENSMUST00000183480 110 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.86□□□□□ -0.67
Fn1P11276 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Fn1P11276 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Fn1P11276 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Gm7857-201ENSMUST00000117957 358 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Gm20426-201ENSMUST00000173657 440 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Gm8285-201ENSMUST00000208293 759 ntBASIC10.86□□□□□ -0.67
Fn1P11276 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.86□□□□□ -0.67
Fn1P11276 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.86□□□□□ -0.67
Fn1P11276 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fn1P11276 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms