Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.54■□□□□ 0.24
Col1a1P11087 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.54■□□□□ 0.24
Col1a1P11087 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.54■□□□□ 0.24
Col1a1P11087 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
Col1a1P11087 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.54■□□□□ 0.24
Col1a1P11087 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.54■□□□□ 0.24
Col1a1P11087 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Col1a1P11087 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col1a1P11087 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.54■□□□□ 0.24
Col1a1P11087 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.54■□□□□ 0.24
Col1a1P11087 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col1a1P11087 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.53■□□□□ 0.24
Col1a1P11087 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.53■□□□□ 0.24
Col1a1P11087 Gm8810-201ENSMUST00000172895 754 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Gm27331-201ENSMUST00000183705 60 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Gm19184-201ENSMUST00000196798 928 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.53■□□□□ 0.24
Col1a1P11087 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col1a1P11087 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.52■□□□□ 0.24
Col1a1P11087 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Col1a1P11087 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col1a1P11087 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col1a1P11087 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col1a1P11087 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col1a1P11087 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col1a1P11087 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.52■□□□□ 0.23
Col1a1P11087 Gm10156-201ENSMUST00000122364 462 ntBASIC16.52■□□□□ 0.23
Col1a1P11087 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.52■□□□□ 0.23
Col1a1P11087 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col1a1P11087 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col1a1P11087 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col1a1P11087 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col1a1P11087 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col1a1P11087 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.51■□□□□ 0.23
Col1a1P11087 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col1a1P11087 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
Col1a1P11087 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.51■□□□□ 0.23
Col1a1P11087 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.51■□□□□ 0.23
Col1a1P11087 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col1a1P11087 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.51■□□□□ 0.23
Col1a1P11087 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.51■□□□□ 0.23
Col1a1P11087 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.51■□□□□ 0.23
Col1a1P11087 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.51■□□□□ 0.23
Col1a1P11087 Gm43118-201ENSMUST00000199149 775 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms