Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Gm15460-201ENSMUST00000118147 391 ntBASIC14.06□□□□□ -0.16
Hoxa4P06798 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.06□□□□□ -0.16
Hoxa4P06798 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.05□□□□□ -0.16
Hoxa4P06798 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hoxa4P06798 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Gm20949-201ENSMUST00000206478 952 ntBASIC14.05□□□□□ -0.16
Hoxa4P06798 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.05□□□□□ -0.16
Hoxa4P06798 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxa4P06798 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxa4P06798 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxa4P06798 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa4P06798 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa4P06798 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxa4P06798 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxa4P06798 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxa4P06798 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms