Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
P06320 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC9.04□□□□□ -0.96
P06320 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC9.04□□□□□ -0.96
P06320 Gm10499-201ENSMUST00000174094 934 ntBASIC9.04□□□□□ -0.96
P06320 Gm29257-201ENSMUST00000186115 639 ntBASIC9.04□□□□□ -0.96
P06320 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC9.04□□□□□ -0.96
P06320 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.04□□□□□ -0.96
P06320 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
P06320 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
P06320 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.04□□□□□ -0.96
P06320 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
P06320 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
P06320 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.03□□□□□ -0.96
P06320 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm15358-201ENSMUST00000119249 520 ntBASIC9.03□□□□□ -0.96
P06320 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.03□□□□□ -0.96
P06320 Gm5587-201ENSMUST00000206270 674 ntBASIC9.03□□□□□ -0.96
P06320 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.03□□□□□ -0.96
P06320 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.03□□□□□ -0.96
P06320 AC093926.2-201ENSMUST00000214468 1228 ntBASIC9.03□□□□□ -0.96
P06320 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
P06320 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
P06320 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC9.03□□□□□ -0.96
P06320 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.03□□□□□ -0.96
P06320 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
P06320 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
P06320 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
P06320 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
P06320 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
P06320 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
P06320 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.02□□□□□ -0.96
P06320 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
P06320 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms