Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a1P02463 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.28■□□□□ 0.36
Col4a1P02463 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a1P02463 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a1P02463 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col4a1P02463 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.27■□□□□ 0.36
Col4a1P02463 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.27■□□□□ 0.36
Col4a1P02463 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.27■□□□□ 0.36
Col4a1P02463 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.27■□□□□ 0.36
Col4a1P02463 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a1P02463 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a1P02463 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a1P02463 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a1P02463 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.27■□□□□ 0.35
Col4a1P02463 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a1P02463 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a1P02463 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a1P02463 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a1P02463 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col4a1P02463 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a1P02463 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm12203-201ENSMUST00000118235 598 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Gm12209-201ENSMUST00000120089 596 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Gm22331-201ENSMUST00000158066 136 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm27331-201ENSMUST00000183705 60 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.26■□□□□ 0.35
Col4a1P02463 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a1P02463 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a1P02463 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col4a1P02463 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.25■□□□□ 0.35
Col4a1P02463 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a1P02463 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm12403-201ENSMUST00000121384 959 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col4a1P02463 Gm8584-201ENSMUST00000171982 758 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm27847-201ENSMUST00000183711 107 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm27375-201ENSMUST00000183799 107 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Gm44397-201ENSMUST00000195950 113 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.25■□□□□ 0.35
Col4a1P02463 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.25■□□□□ 0.35
Col4a1P02463 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Col4a1P02463 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Col4a1P02463 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a1P02463 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col4a1P02463 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col4a1P02463 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.24■□□□□ 0.35
Col4a1P02463 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms