Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.06□□□□□ -0.8
Hbb-b1P02088 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.06□□□□□ -0.8
Hbb-b1P02088 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.06□□□□□ -0.8
Hbb-b1P02088 Gm9987-201ENSMUST00000069768 567 ntBASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.06□□□□□ -0.8
Hbb-b1P02088 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.05□□□□□ -0.8
Hbb-b1P02088 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.05□□□□□ -0.8
Hbb-b1P02088 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.05□□□□□ -0.8
Hbb-b1P02088 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.05□□□□□ -0.8
Hbb-b1P02088 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Hbb-b1P02088 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hbb-b1P02088 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.04□□□□□ -0.8
Hbb-b1P02088 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.04□□□□□ -0.8
Hbb-b1P02088 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.04□□□□□ -0.8
Hbb-b1P02088 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Hbb-b1P02088 Gm26039-201ENSMUST00000158152 144 ntBASIC10.04□□□□□ -0.8
Hbb-b1P02088 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.04□□□□□ -0.8
Hbb-b1P02088 Odf3b-204ENSMUST00000227834 930 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms