Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vti1aO89116 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vti1aO89116 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.42■□□□□ 0.06
Vti1aO89116 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vti1aO89116 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vti1aO89116 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Vti1aO89116 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vti1aO89116 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.41■□□□□ 0.06
Vti1aO89116 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.41■□□□□ 0.06
Vti1aO89116 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.41■□□□□ 0.06
Vti1aO89116 Gm46209-201ENSMUST00000217912 553 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Gm6218-201ENSMUST00000219812 628 ntBASIC15.41■□□□□ 0.06
Vti1aO89116 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vti1aO89116 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vti1aO89116 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vti1aO89116 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.4■□□□□ 0.06
Vti1aO89116 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.4■□□□□ 0.06
Vti1aO89116 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.4■□□□□ 0.06
Vti1aO89116 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.4■□□□□ 0.06
Vti1aO89116 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm43438-201ENSMUST00000198133 379 ntBASIC15.4■□□□□ 0.06
Vti1aO89116 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vti1aO89116 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vti1aO89116 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.39■□□□□ 0.05
Vti1aO89116 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Vti1aO89116 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Vti1aO89116 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vti1aO89116 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vti1aO89116 Gm14127-201ENSMUST00000117906 678 ntBASIC15.39■□□□□ 0.05
Vti1aO89116 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Vti1aO89116 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.39■□□□□ 0.05
Vti1aO89116 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vti1aO89116 Gm7653-201ENSMUST00000214567 508 ntBASIC15.39■□□□□ 0.05
Vti1aO89116 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.39■□□□□ 0.05
Vti1aO89116 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.39■□□□□ 0.05
Vti1aO89116 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vti1aO89116 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms