Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Gm26464-201ENSMUST00000157094 305 ntBASIC14.89□□□□□ -0.03
Ttc3O88196 Mir7654-201ENSMUST00000185082 70 ntBASIC14.89□□□□□ -0.03
Ttc3O88196 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ttc3O88196 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.89□□□□□ -0.03
Ttc3O88196 Gm8463-201ENSMUST00000208573 613 ntBASIC14.89□□□□□ -0.03
Ttc3O88196 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ttc3O88196 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.89□□□□□ -0.03
Ttc3O88196 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ttc3O88196 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ttc3O88196 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.88□□□□□ -0.03
Ttc3O88196 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.88□□□□□ -0.03
Ttc3O88196 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ttc3O88196 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ttc3O88196 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ttc3O88196 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.88□□□□□ -0.03
Ttc3O88196 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.88□□□□□ -0.03
Ttc3O88196 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.88□□□□□ -0.03
Ttc3O88196 Gm37714-201ENSMUST00000194742 342 ntBASIC14.88□□□□□ -0.03
Ttc3O88196 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.88□□□□□ -0.03
Ttc3O88196 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.88□□□□□ -0.03
Ttc3O88196 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.88□□□□□ -0.03
Ttc3O88196 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ttc3O88196 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm15240-201ENSMUST00000118156 720 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ttc3O88196 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ttc3O88196 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ttc3O88196 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ttc3O88196 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.87□□□□□ -0.03
Ttc3O88196 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm19078-201ENSMUST00000206311 727 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.87□□□□□ -0.03
Ttc3O88196 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ttc3O88196 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.86□□□□□ -0.03
Ttc3O88196 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.86□□□□□ -0.03
Ttc3O88196 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.86□□□□□ -0.03
Ttc3O88196 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.86□□□□□ -0.03
Ttc3O88196 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ttc3O88196 Gm15376-201ENSMUST00000122258 783 ntBASIC14.86□□□□□ -0.03
Ttc3O88196 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ttc3O88196 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms