Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ldb2O55203 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb2O55203 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ldb2O55203 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ldb2O55203 Gm6222-201ENSMUST00000120787 396 ntBASIC14.23□□□□□ -0.13
Ldb2O55203 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.23□□□□□ -0.13
Ldb2O55203 Gm24158-201ENSMUST00000175263 71 ntBASIC14.23□□□□□ -0.13
Ldb2O55203 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.23□□□□□ -0.13
Ldb2O55203 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.23□□□□□ -0.13
Ldb2O55203 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ldb2O55203 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb2O55203 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.23□□□□□ -0.13
Ldb2O55203 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ldb2O55203 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 BC001981-202ENSMUST00000191393 1545 ntBASIC14.22□□□□□ -0.13
Ldb2O55203 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Ldb2O55203 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.22□□□□□ -0.13
Ldb2O55203 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ldb2O55203 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.22□□□□□ -0.13
Ldb2O55203 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.22□□□□□ -0.13
Ldb2O55203 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.22□□□□□ -0.13
Ldb2O55203 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ldb2O55203 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ldb2O55203 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb2O55203 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb2O55203 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Mir449b-201ENSMUST00000104833 80 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm14701-201ENSMUST00000117156 348 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ldb2O55203 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm27631-201ENSMUST00000184163 466 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Gm10253-201ENSMUST00000194270 940 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm5779-201ENSMUST00000218467 910 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms