Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pde6dO55057 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pde6dO55057 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pde6dO55057 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Pde6dO55057 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pde6dO55057 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pde6dO55057 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.27□□□□□ -0.6
Pde6dO55057 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Pde6dO55057 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pde6dO55057 Gm8749-201ENSMUST00000117737 331 ntBASIC11.27□□□□□ -0.61
Pde6dO55057 Gm8655-201ENSMUST00000221159 852 ntBASIC11.27□□□□□ -0.61
Pde6dO55057 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pde6dO55057 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pde6dO55057 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.27□□□□□ -0.61
Pde6dO55057 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.27□□□□□ -0.61
Pde6dO55057 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pde6dO55057 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pde6dO55057 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Pde6dO55057 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Pde6dO55057 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.26□□□□□ -0.61
Pde6dO55057 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.26□□□□□ -0.61
Pde6dO55057 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pde6dO55057 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.26□□□□□ -0.61
Pde6dO55057 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Pde6dO55057 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pde6dO55057 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.25□□□□□ -0.61
Pde6dO55057 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms