Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.37■□□□□ 0.05
Nr1i3O35627 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nr1i3O35627 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm2810-201ENSMUST00000118681 990 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm11025-201ENSMUST00000140773 466 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.36■□□□□ 0.05
Nr1i3O35627 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nr1i3O35627 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nr1i3O35627 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.35■□□□□ 0.05
Nr1i3O35627 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm17271-201ENSMUST00000165535 355 ntBASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm18057-201ENSMUST00000208220 503 ntBASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.35■□□□□ 0.05
Nr1i3O35627 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.35■□□□□ 0.05
Nr1i3O35627 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr1i3O35627 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.35■□□□□ 0.05
Nr1i3O35627 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.34■□□□□ 0.05
Nr1i3O35627 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Gm15957-201ENSMUST00000118893 974 ntBASIC15.34■□□□□ 0.05
Nr1i3O35627 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.34■□□□□ 0.05
Nr1i3O35627 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.34■□□□□ 0.05
Nr1i3O35627 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 365.2 ms