Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Npc1O35604 Gm18766-201ENSMUST00000189811 808 ntBASIC13.98□□□□□ -0.17
Npc1O35604 Gm29541-201ENSMUST00000191351 678 ntBASIC13.98□□□□□ -0.17
Npc1O35604 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Npc1O35604 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Npc1O35604 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Npc1O35604 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Npc1O35604 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.98□□□□□ -0.17
Npc1O35604 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.97□□□□□ -0.17
Npc1O35604 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Npc1O35604 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Gm5566-201ENSMUST00000116118 459 ntBASIC13.97□□□□□ -0.17
Npc1O35604 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.97□□□□□ -0.17
Npc1O35604 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Npc1O35604 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.97□□□□□ -0.17
Npc1O35604 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Npc1O35604 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npc1O35604 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Npc1O35604 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Npc1O35604 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.96□□□□□ -0.17
Npc1O35604 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Npc1O35604 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Npc1O35604 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Gm13453-201ENSMUST00000118708 357 ntBASIC13.96□□□□□ -0.17
Npc1O35604 Gm13823-201ENSMUST00000119930 345 ntBASIC13.96□□□□□ -0.17
Npc1O35604 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.96□□□□□ -0.17
Npc1O35604 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.96□□□□□ -0.17
Npc1O35604 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.96□□□□□ -0.17
Npc1O35604 Gm9719-201ENSMUST00000162765 543 ntBASIC13.96□□□□□ -0.17
Npc1O35604 Gm27622-201ENSMUST00000183779 60 ntBASIC13.96□□□□□ -0.17
Npc1O35604 Gm28630-201ENSMUST00000187806 498 ntBASIC13.96□□□□□ -0.17
Npc1O35604 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Npc1O35604 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npc1O35604 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npc1O35604 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npc1O35604 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.96□□□□□ -0.18
Npc1O35604 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npc1O35604 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms