Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Stx1aO35526 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Stx1aO35526 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Stx1aO35526 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Gm13036-201ENSMUST00000117799 748 ntBASIC16.09■□□□□ 0.17
Stx1aO35526 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.09■□□□□ 0.17
Stx1aO35526 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.09■□□□□ 0.17
Stx1aO35526 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.09■□□□□ 0.17
Stx1aO35526 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.09■□□□□ 0.17
Stx1aO35526 Gm10154-201ENSMUST00000084445 354 ntBASIC16.09■□□□□ 0.17
Stx1aO35526 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.09■□□□□ 0.17
Stx1aO35526 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stx1aO35526 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Stx1aO35526 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Stx1aO35526 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Stx1aO35526 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.08■□□□□ 0.17
Stx1aO35526 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stx1aO35526 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Stx1aO35526 Acot6-202ENSMUST00000222921 3622 ntBASIC16.08■□□□□ 0.16
Stx1aO35526 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Gm13597-201ENSMUST00000121239 375 ntBASIC16.08■□□□□ 0.16
Stx1aO35526 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.08■□□□□ 0.16
Stx1aO35526 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.08■□□□□ 0.16
Stx1aO35526 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Stx1aO35526 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.08■□□□□ 0.16
Stx1aO35526 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Stx1aO35526 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stx1aO35526 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.07■□□□□ 0.16
Stx1aO35526 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm24589-201ENSMUST00000116692 94 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm10060-201ENSMUST00000212002 111 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Gm45747-201ENSMUST00000212203 999 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.07■□□□□ 0.16
Stx1aO35526 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.07■□□□□ 0.16
Stx1aO35526 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stx1aO35526 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stx1aO35526 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms