Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm17968-201ENSMUST00000194902 784 ntBASIC15.32■□□□□ 0.04
Cpsf2O35218 Mzt1-203ENSMUST00000227948 952 ntBASIC15.32■□□□□ 0.04
Cpsf2O35218 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm7461-201ENSMUST00000058918 827 ntBASIC15.32■□□□□ 0.04
Cpsf2O35218 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.32■□□□□ 0.04
Cpsf2O35218 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cpsf2O35218 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf2O35218 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.31■□□□□ 0.04
Cpsf2O35218 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm45747-201ENSMUST00000212203 999 ntBASIC15.31■□□□□ 0.04
Cpsf2O35218 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf2O35218 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.31■□□□□ 0.04
Cpsf2O35218 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf2O35218 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.3■□□□□ 0.04
Cpsf2O35218 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.3■□□□□ 0.04
Cpsf2O35218 Gm14140-201ENSMUST00000119999 995 ntBASIC15.3■□□□□ 0.04
Cpsf2O35218 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpsf2O35218 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpsf2O35218 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.3■□□□□ 0.04
Cpsf2O35218 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cpsf2O35218 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cpsf2O35218 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf2O35218 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms