Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Bhlhe40O35185 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm12859-201ENSMUST00000117834 427 ntBASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm42612-201ENSMUST00000197986 623 ntBASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm43170-201ENSMUST00000199827 612 ntBASIC14.06□□□□□ -0.16
Bhlhe40O35185 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.06□□□□□ -0.16
Bhlhe40O35185 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Bhlhe40O35185 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Gm22189-201ENSMUST00000103822 86 ntBASIC14.05□□□□□ -0.16
Bhlhe40O35185 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.05□□□□□ -0.16
Bhlhe40O35185 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.05□□□□□ -0.16
Bhlhe40O35185 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Bhlhe40O35185 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Gm14042-201ENSMUST00000120139 833 ntBASIC14.04□□□□□ -0.16
Bhlhe40O35185 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.04□□□□□ -0.16
Bhlhe40O35185 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Gm33320-201ENSMUST00000192232 530 ntBASIC14.04□□□□□ -0.16
Bhlhe40O35185 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Bhlhe40O35185 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Bhlhe40O35185 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm15460-201ENSMUST00000118147 391 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms