Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm5354-201ENSMUST00000182417 973 ntBASIC12.24□□□□□ -0.45
Casp6O08738 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Casp6O08738 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.24□□□□□ -0.45
Casp6O08738 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.24□□□□□ -0.45
Casp6O08738 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Casp6O08738 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.23□□□□□ -0.45
Casp6O08738 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Casp6O08738 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.23□□□□□ -0.45
Casp6O08738 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Casp6O08738 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Casp6O08738 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Casp6O08738 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.22□□□□□ -0.45
Casp6O08738 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
Casp6O08738 Gm10275-202ENSMUST00000168697 495 ntBASIC12.22□□□□□ -0.45
Casp6O08738 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.22□□□□□ -0.45
Casp6O08738 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Casp6O08738 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.22□□□□□ -0.45
Casp6O08738 Gm10275-201ENSMUST00000092620 635 ntBASIC12.22□□□□□ -0.45
Casp6O08738 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Casp6O08738 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms