Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa8J3QNX5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa8J3QNX5 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Rubie-203ENSMUST00000227803 2430 ntBASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Olfr286-202ENSMUST00000205305 969 ntBASIC13.05□□□□□ -0.32
Shisa8J3QNX5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Shisa8J3QNX5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa8J3QNX5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms