Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.71□□□□□ -0.05
Trim55G3X8Y1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim55G3X8Y1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim55G3X8Y1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.7□□□□□ -0.06
Trim55G3X8Y1 AA414768-201ENSMUST00000121924 1257 ntBASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim55G3X8Y1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim55G3X8Y1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim55G3X8Y1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms