Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh1F7BJK1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Gm8584-201ENSMUST00000171982 758 ntBASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 AV026068-213ENSMUST00000223675 1171 ntBASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh1F7BJK1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh1F7BJK1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms