Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.26■□□□□ 0.67
Zc3h13E9Q784 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm11618-201ENSMUST00000117946 267 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Mir7032-201ENSMUST00000185154 79 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm13886-201ENSMUST00000117876 1183 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm13123-201ENSMUST00000122173 492 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Gm25927-201ENSMUST00000175058 117 ntBASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h13E9Q784 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 AC132384.14-201ENSMUST00000219346 1147 ntBASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Gm9333-201ENSMUST00000205452 1323 ntBASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h13E9Q784 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm6023-201ENSMUST00000118217 606 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm37922-201ENSMUST00000195596 455 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm42550-201ENSMUST00000201553 960 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm21769-201ENSMUST00000211922 111 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm8227-201ENSMUST00000223306 571 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gm15544-201ENSMUST00000118776 1531 ntBASIC19.23■□□□□ 0.67
Zc3h13E9Q784 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h13E9Q784 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Gm7046-201ENSMUST00000221351 977 ntBASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Gm7593-201ENSMUST00000187246 644 ntBASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h13E9Q784 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms