Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm7488-201ENSMUST00000117148 684 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm16215-201ENSMUST00000161990 637 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm9726-201ENSMUST00000180321 678 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm27631-201ENSMUST00000184163 466 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm37230-201ENSMUST00000194491 818 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Dupd1-202ENSMUST00000224735 548 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh17E9PXF0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm15653-201ENSMUST00000119247 907 ntBASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm44855-201ENSMUST00000205725 362 ntBASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh17E9PXF0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Gm5745-201ENSMUST00000183748 313 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Gm46209-201ENSMUST00000217912 553 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh17E9PXF0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms