Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Srp54bE9PXC0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Srp54bE9PXC0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gm14042-201ENSMUST00000120139 833 ntBASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gm15393-201ENSMUST00000120499 219 ntBASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.08□□□□□ -0.16
Srp54bE9PXC0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.08□□□□□ -0.16
Srp54bE9PXC0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Srp54bE9PXC0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm15460-201ENSMUST00000118147 391 ntBASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm21854-201ENSMUST00000179901 471 ntBASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm9797-201ENSMUST00000052902 613 ntBASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Srp54bE9PXC0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms