Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmf1B9EKI3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.33■□□□□ 0.69
Tmf1B9EKI3 Gm15460-201ENSMUST00000118147 391 ntBASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Gm14719-201ENSMUST00000121891 340 ntBASIC19.33■□□□□ 0.68
Tmf1B9EKI3 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Gm27838-201ENSMUST00000184829 128 ntBASIC19.33■□□□□ 0.68
Tmf1B9EKI3 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmf1B9EKI3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tmf1B9EKI3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.31■□□□□ 0.68
Tmf1B9EKI3 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmf1B9EKI3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.31■□□□□ 0.68
Tmf1B9EKI3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Gm14127-201ENSMUST00000117906 678 ntBASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmf1B9EKI3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms