Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Gm8584-201ENSMUST00000171982 758 ntBASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Psmb5-202ENSMUST00000227257 622 ntBASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc112A0AUP1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc112A0AUP1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc112A0AUP1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc112A0AUP1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc112A0AUP1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Gm27920-201ENSMUST00000183953 96 ntBASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc112A0AUP1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Gm18733-201ENSMUST00000173950 856 ntBASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Rpph1-201ENSMUST00000175096 319 ntBASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc112A0AUP1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc112A0AUP1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms