Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Gm14127-201ENSMUST00000117906 678 ntBASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Gm28631-201ENSMUST00000190740 334 ntBASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Gm9794-201ENSMUST00000202370 423 ntBASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap99A0A140LIX9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cfap99A0A140LIX9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap99A0A140LIX9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gm24694-201ENSMUST00000180054 110 ntBASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gm27663-201ENSMUST00000184839 110 ntBASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Shd-206ENSMUST00000225145 998 ntBASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfap99A0A140LIX9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms