Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv29A0A0G2LB96 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv29A0A0G2LB96 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.9□□□□□ -0.51
Trbv29A0A0G2LB96 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Trbv29A0A0G2LB96 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gm16198-201ENSMUST00000118766 670 ntBASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv29A0A0G2LB96 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Gm13597-201ENSMUST00000121239 375 ntBASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Gm11452-201ENSMUST00000122376 690 ntBASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv29A0A0G2LB96 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms