Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm43799-201ENSMUST00000201845 579 ntBASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav8-1A0A075B641 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav8-1A0A075B641 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Mir770-201ENSMUST00000103252 94 ntBASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms