Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm11594-201ENSMUST00000122313 162 ntBASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.34□□□□□ -0.11
H2afb2S4R1M3 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb2S4R1M3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb2S4R1M3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Gm13365-201ENSMUST00000121188 973 ntBASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb2S4R1M3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms